| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
Short Communication |


From the Department of Dermatology,*
Columbia
University, College of Physicians and Surgeons, New York, New York; and
the Department of Pathology,
University of
Massachusetts Medical School, Worcester, Massachusetts
| Abstract |
|---|
|
|
|---|
T and CC
TT
nucleotide changes. Our data demonstrate that the p53
and PTCH genes are both implicated in the development of
early-onset BCC. The identification of UV-specific nucleotide changes
in both tumor suppressor genes suggests that UV exposure is an
important risk factor in early onset of BCC.
| Introduction |
|---|
|
|
|---|
T transitional changes at pyrimidine
sites, including CC
TT double-base changes, are the most frequent
form of nucleotide base substitution at the UVB-damaged dipyrimidine
sites.
p53 mutations have been shown in 30 to 50% of BCCs studied,
and more than half of these mutations were UV-specific C
T or CC
TT
changes.4-9
These UV-specific changes in the
p53 gene have also been detected in DNA from normal,
sun-exposed skin.10,11
The human homologue of the
Drosophila patched gene, PTCH, was first isolated
by two independent groups during their search for the gene responsible
for Nevoid basal cell carcinoma syndrome.12,13
Sequence
analysis of DNA from Nevoid basal cell carcinoma syndrome individuals
showed a series of germline mutations in the PTCH gene.
Subsequently, somatic mutations in the PTCH gene were
identified in 20 to 30% of the sporadic BCCs
studied.12-18
Mutations detected in the PTCH
genes from sporadic BCCs also contained UV-specific C
T and CC
TT
nucleotide changes. Most of the PTCH mutations detected have
been nonsense mutations, deletions, and insertions that lead to a
premature termination of PTCH proteins.17
An individuals DNA repair ability is thought to play a role in the development of BCC. A rare inherited disorder, xeroderma pigmentosum (XP), provides a human model that underscores the important role of DNA repair in preventing human cancers. Individuals with XP are unable to repair DNA damage19 and are 2,000 times more likely than normal individuals to develop sunlight-related BCC at an early age.20 Recently, a group studying 22 BCCs from patients with XP identified high levels (>60%) of UV-specific mutations in the PTCH gene.21 Epidemiological studies have also shown that individuals with BCC have a decreased ability to repair UV-induced DNA damage compared to control individuals without BCC.22
The incidence of sporadic BCCs increases in individuals older than age 55, with the greatest incidence reported in individuals who are older than 70 years old. BCC is rare in individuals who are younger than 30 years old. In a study conducted in a defined population in a city in southern Sweden, only 12 of 249 (4.8%) BCC cases were from individuals younger than 30 years old.23 Although some of these patients may have had a history of significant UV exposure, the development of BCCs at this early age is unusual. We postulated that mutations in the PTCH and p53 genes might have contributed to the development of skin cancers in this young population. To test that notion, we retrieved 24 paraffin blocks from 24 early onset BCC cases. Genomic DNA from these BCC samples was subjected to mutation analysis of the tumor suppressor genes PTCH and p53.
| Materials and Methods |
|---|
|
|
|---|
Biopsy specimens with a confirmed pathological diagnosis of BCC from individuals who were younger than 30 years old at the time of biopsy were obtained from the Dermatopathology Laboratory at Columbia University. Each individuals age, ethnic background, and medical history were reviewed by their dermatologist and none of these individuals has Nevoid basal cell carcinoma syndrome. The study was approved by the Columbia-Presbyterian Medical Center Institutional Review Board.
DNA Extraction
Paraffin sections containing >50% tumor tissue were placed into a 1.5-ml microcentrifuge tube and washed with xylene (three times for 30 minutes each). The sections were then digested in a buffer with proteinase K (provided in the QiAamp tissue kit; Qiagen, Valencia, CA) at 55°C overnight. The genomic DNA was then extracted following the instructions and columns provided by the QiAamp Tissue Kit from Qiagen. Genomic DNA of the peripheral blood from 20 normal individuals was used as normal control.
Single-Stranded Conformation Polymorphism (SSCP) Analysis
SSCP-polymerase chain reaction (PCR) reaction mixtures containing 25 ng of each primer, 22.5 µl of platinum PCR supermix (Life Technologies, Inc., Rockville, MD) and 0.5 µl of [33P]dCTP (Dupont-NEN, Boston, MA) were subjected to 30 cycles of PCR amplification. After thermal cycling, 1 µl of PCR product was added to 10 µl of stop solution (95% formamide, 10 mmol/L NaOH, 0.25% bromophenol blue, and 0.25% xylene cyanol). The mixtures were heated to 94°C for 3 minutes and placed on ice immediately. Three microliters of the denatured mixtures were loaded onto a 0.5x mutation detection enhancement gel (FMC Bioproducts, Rockland, ME) with 10% glycerol and run at 10 W for 20 hours at room temperature. PCR products with SSCP variants were sequenced using a BigDye terminator cycle sequencing kit (ABI) and were then run on an Applied Biosystems (Foster City, CA) 310 automated sequencing system.
Mutation Screening for the PTCH Gene
A set of 20 pairs of primers flanking exon 3 to exon 23 of the PTCH gene, as previously described,13,24 was used to amplify tumor genomic DNA. These PCR amplicons were then subjected to a SSCP-PCR reaction with the nested primers. All mutations were confirmed by new PCR and sequence reactions starting from DNA.
Mutation Screening for the p53 Gene
Every tumor sample was screened for mutations in the exon 4 to
exon 8 of the p53 gene by direct sequencing analysis.
Genomic DNA from each case was subjected to PCR amplification with
primers flanking each exon of the p53 gene. The resulting
amplicons were then sequenced and analyzed on an Applied Biosystems
model 310 DNA sequencer. Table 1
lists
the p53 primers used. Mutations were confirmed by new PCR
and sequence reactions.
|
| Results |
|---|
|
|
|---|
Genomic DNA isolated from each BCC sample was first subjected to a PCR-SSCP screening for mutations in the PTCH gene. A total of 15 SSCP variants were detected in 13 BCC samples. Sequence analysis of PCR products containing the SSCP variants revealed 15 sequence alternations spanning the entire PTCH gene. Twelve of the 15 sequence alternations were single nucleotide changes, resulting in six nonsense mutations, five missense mutations, and one silent mutation. In addition, two frameshift mutations and one in-frame mutation were detected. These consisted of a splice site mutation in exon 13, an AT insertion in exon 17, and a 15-bp deletion in exon 15, respectively. These three mutations, together with the six nonsense mutations, give rise to truncated PTCH proteins (Table 2).
Five missense mutations were detected spanning exons 4 to 21 of the
coding sequences of the PTCH gene (Table 2 and Figure 1
). Four of these five missense mutations
were in or near transmembrane domains. Eleven of the 12 single
nucleotide changes detected occurred at the dipyrimidine sites. Of 12
single nucleotide changes, five C
T and five G
A transitional
changes were detected. They were consistent with UV-induced sunlight
damage. We also detected a C
T transitional change at nucleotide 2004
in exon 14, resulting in a silent mutation (tyrosine to tyrosine
substitution at codon 668). All five missense mutations and the one
silent mutation were not detected in 40 normal control alleles,
suggesting that they were not sequence polymorphisms.
|
T and CC
TT changes (Table 2 and Figure 1| Discussion |
|---|
|
|
|---|
Fifty-four percent (13 of 24) of the BCC samples in this study had mutations in the PTCH gene, compared to an average PTCH mutation rate of 35% in BCC samples from older populations.13-15,17,18 The difference is statistically significant by chi-square test (P < 0.05). Of the 15 nucleotide changes in the PTCH gene, 80% (12 of 15) were point mutations. Our results differ from those reported in published studies on sporadic BCC in older age groups,14 where 47% (nine of 19) of the nucleotide changes were point mutations. Our data are similar to that of a recent study in BCC from individuals with XP. In that study, 73% (16 of 22) of BCC samples contained PTCH mutations, and 89% of them were point mutations.21 It has been suggested that decreased DNA repair ability in XP individuals contributes to the high frequency of PTCH mutations and high level of point mutations.21 Based on our findings, we speculate that early onset BCC results from a reduced ability to repair DNA damage. Using individuals without BCC as normal controls, Wei and colleagues22 showed that a combination of reduced DNA repair ability and exposure to UV irradiation was associated with an increased risk of BCC.
The PTCH gene encodes two large extracellular loops and 12 transmembrane domains that binds to sonic hehedgehog, a member of the hedgehog gene family.27 The two large extracellular domains of the PTCH gene are required for this binding.29 In this study, four of the six sequence alterations that led to five missense mutations and one silent mutation, were located in the transmembrane domains. The remaining nine nucleotide changes that we observed are predicted to result in a truncated PTCH protein. The mutations seen in our population differ from those seen in Nevoid basal cell carcinoma syndrome individuals, in whom most of the PTCH germline mutations reported were insertions and deletions.28
In our group of BCC patients, we found 15 p53 mutations in
11 BCC samples. Sixty percent (nine of 15) of these mutations were
UV-specific C
T and CC
TT changes. The increased incidence of point
mutations in PTCH coupled with UV-specific mutations in
p53 suggests that the young individuals in our patient
population may have a decreased ability to repair UV-induced DNA
damage. Overall, we showed that 37% (nine of 24) of our BCC samples
had mutations in both PTCH and p53 genes. Three
BCC samples had only PTCH mutations, and two BCC samples had
only p53 mutations.
In conclusion, we have found a series of mutations in the PTCH and p53 genes in BCC samples from a group of individuals with early onset BCC. We have shown that similar to previous studies in older age population, UV irradiation plays a major role in the development of BCC in a young population. We speculate that these young individuals have decreased DNA repair ability that renders them more susceptible to UV-induced DNA damage and, therefore, prone to develop BCC at a younger age. Further studies are needed to assess DNA repair ability in this population and to evaluate the role of other risk factors in the development of BCC in young individuals.
|
|
| Acknowledgements |
|---|
| Footnotes |
|---|
Supported by grants from the National Institute of Arthritis and Musculoskeletal and Skin Diseases (P&F project, PO-30 AR44535, to H. C. T.) and the National Institute of Aging (AG00760 to H. C. T. and AG00694 to M. P.).
Accepted for publication October 26, 2000.
| References |
|---|
|
|
|---|
This article has been cited by other articles:
![]() |
A. Besaratinia, S.-i. Kim, and G. P. Pfeifer Rapid repair of UVA-induced oxidized purines and persistence of UVB-induced dipyrimidine lesions determine the mutagenicity of sunlight in mouse cells FASEB J, July 1, 2008; 22(7): 2379 - 2392. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. J. Taverna, J.-L. Selam, and G. Slama Association between a Protein Polymorphism in the Start Codon of the Vitamin D Receptor Gene and Severe Diabetic Retinopathy in C-Peptide-Negative Type 1 Diabetes J. Clin. Endocrinol. Metab., August 1, 2005; 90(8): 4803 - 4808. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Mancuso, S. Pazzaglia, M. Tanori, H. Hahn, P. Merola, S. Rebessi, M. J. Atkinson, V. Di Majo, V. Covelli, and A. Saran Basal Cell Carcinoma and Its Development: Insights from Radiation-Induced Tumors in Ptch1-Deficient Mice Cancer Res., February 1, 2004; 64(3): 934 - 941. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Ramachandran, A. A. Fryer, T. Lovatt, A. Smith, J. Lear, P. W. Jones, and R. C. Strange The rate of increase in the numbers of primary sporadic basal cell carcinomas during follow up is associated with age at first presentation Carcinogenesis, December 1, 2002; 23(12): 2051 - 2054. [Abstract] [Full Text] [PDF] |
||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |