Supplemental materials for Astolfi et al, Am J Pathol 2005, 166:1205-1216

Files in this Data Supplement:

• Supplemental Tables A-E - Supplemental Tables A-E (Adobe PDF, 288KB) - Supplemental Table A: Raw data of “vaccination” gene list (155 probes). Signals are expressed as log2 probe intensities; Supplemental Table B: Probes significantly different between lymph node-containing and lymph node-deprived mammary glands of vaccinated, 15 week old Balb-NeuT mice; Supplemental Table C: Raw data of “tumor” gene list (1069 probes). Signals are expressed as log2 probe intensities; Supplemental Table D: Raw data of “HER-2/neu” gene list (103 probes). Signals are expressed as log2 probe intensities; Supplemental Table E: List of mouse orthologs of the human "intrinsic" gene list; Supplemental Table F: List of mouse orthologs of the human gene list
• Supplemental Figures S1 and S2 - Supplemental Figures S1 and S2 (Adobe PDF, 22.9KB) - Supplemental Figure S1: Clustering by 6x1 Self Organizing Maps of the “vaccination” gene list on the three time points of vaccination time course. The genes in each cluster are shown in Figure 3. Raw data from all the samples and cluster membership is reported for each gene in Supplemental Table A; Supplemental Figure S2: Clustering by 3x3 Self Organizing Maps of the “tumor” gene list on the four time points of tumor growth. Gene Ontology categories and the corresponding percentage of representation in the list are indicated within each graph. Raw data from all the samples and cluster membership is reported for each gene in Supplemental Table C.