| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
Published online before print May 31, 2007
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||



From St. Johns Institute of Dermatology,* National Institute for Health Research Biomedical Research Centre, Kings College London, London; Pfizer Global Research and Development,
Sandwich, Kent; and the National Heart and Lung Institute,
Imperial College London, London, United Kingdom
| Abstract |
|---|
|
|
|---|
and the Th1 cytokine interferon-
. When compared with patient-matched, nonlesional skin biopsies, psoriatic samples exhibited regulation of 90 transcripts including several members of the epidermal differentiation complex, molecules with antimicrobial activity, and hyperproliferation-associated keratins. Stimulation of keratinocytes with interferon-
resulted in regulation of 252 transcripts, with particularly strong expression of the CXCR3-binding ligands CXCL9, -10, and -11 and class II major histocompatibility complex genes, primarily those of the HLA-DR and -DP families. In contrast, the transcriptome resulting from exposure of keratinocytes to IL-1
elicited differences in just 19 transcripts, particularly genes within the epidermal differentiation complex and antimicrobial molecules, including PI3 and DEFB4. Major differences between the two keratinocyte transcriptomes were exhibited with only five induced IL-1
transcripts also regulated in the interferon-
set. Unexpectedly, there was a high correlation between psoriatic lesional tissue and the IL-1
transcriptome. These findings suggest that the inflammatory milieu in the epidermal microenvironment in psoriasis is more likely dependent on evolutionarily ancient cytokines such as IL-1, rather than those of the adaptive immune response.
and interleukin (IL)-2, within psoriatic lesions.2,3
Xenotransplantation experiments involving grafting of nonlesional skin from psoriatic patients to immunodeficient mice and the subsequent introduction of autologous, stimulated immunocytes to induce plaque formation4
have demonstrated the obligatory role of these cells in the pathology. Further, many effective antipsoriatic therapies, including cyclosporin A, alefacept, and efalizumab, directly target T cells as their major mode of action.5
As the predominant cell type within the epidermis, keratinocytes have been demonstrated to be pivotal in the initiation, maintenance, and regulation of immune responses in the skin.6
They can synthesize a diverse array of immunomodulatory molecules, including a number of primary cytokines [eg, IL-1 and tumor necrosis factor (TNF)-
] and chemokines such as IL-8 required to induce vascular endothelial molecules and recruit T cells to the epidermis. In addition, stimulation of keratinocytes with T-cell-derived molecules such as IFN-
up-regulates a number of major histocompatibility complex and costimulatory molecules inducing amplification of cytokine cascades essential in the potentiation of cutaneous inflammation.7
A key difference between the immunological responses induced in T cells and keratinocytes is that of antigen specificity. Keratinocytes react to infection or other trauma with an evolutionarily ancient, non-antigen-specific set of responses (innate immunity), whereas T cells use somatically recombined receptor genes to mediate an antigen-specific response (adaptive immunity). Effective host defense activities within the skin require interactions between the innate and adaptive immune systems. For example, innate proinflammatory mediators such as IL-1
released from keratinocytes following trauma are a prerequisite for the extravasation of memory T cells to the epidermis and subsequent antigen-specific responses.8
Such interactions suggest that keratinocyte-mediated (innate) responses may have a fundamental role to play in psoriatic pathology.9,10 A number of transgenic mice exhibiting psoriasiform phenotypes, in which keratinocyte molecules were either overexpressed11,12 or deleted,13,14 support this hypothesis, and recent data indicating an essential role for resident plasmacytoid predendritic cells in psoriatic pathology15 further underpin the concept that innate immune mechanisms are central to this disease.
Novel insights into the molecular mechanisms driving psoriatic plaques have been provided by a number of recent studies using high-density cDNA microarrays to perform global comparisons of gene expression in lesional skin with biopsies from clinically normal skin.16-19 Thus, the psoriatic transcriptome may be broadly defined as comprising molecules found on the epidermal differentiation complex on chromosome 1q (eg, S100A7, SPRR1B), molecules with antimicrobial activity (eg, DEFB4, LCN2), hyperproliferation-associated molecules (eg, KRT6A, KRT16), and molecules involved in the regulation of proteolysis (eg, SERPINB3, PI3). In addition, numerous cytokines or cytokine-induced molecules associated with both keratinocytes (eg, IL1B, CXCL8/IL-8) and T cells (eg, IFNG, STAT1) were commonly induced in these studies.
To explore whether psoriasis is associated with the innate or adaptive immune response at the molecular level, we used microarray techniques to analyze psoriatic skin and compared this with the transcriptomes generated from primary human keratinocytes exposed to either IL-1
or IFN-
, as simple models of innate and adaptive immunity, respectively.
| Materials and Methods |
|---|
|
|
|---|
Six unrelated patients with chronic plaque psoriasis were recruited from a local dermatology outpatient clinic. None had received any systemic or topical therapy (except emollients) for at least 6 weeks before biopsy. Following local ethical committee approval and informed consent, a pair of shave biopsies was excised from each patient using a keratome, one intralesionally and the other from clinically normal skin, at least 20 mm from any plaque. All biopsies were snap-frozen in liquid nitrogen to maximize ex vivo transcriptome accuracy before RNA extraction. In two additional patients, 2-mm punch biopsies were removed from the center of the keratomes subsequent to excision, fixed, and processed according to standard techniques for histological examination.
Keratinocyte Culture and Cytokine Treatment
Following local ethical committee approval and informed consent, primary human keratinocyte cultures were established as described previously20
from breast reduction tissue derived from six unrelated female donors. Second-passage cells were grown to approximately 90% confluence in 25-cm2 flasks and quiesced in supplement-free keratinocyte growth medium (EpiLife, Cascade Biologics, Mansfield, UK) for 24 hours before the addition of either recombinant human IL-1
(100 ng/ml final concentration), recombinant human IFN-
(20 ng/ml final concentration; specific activity = 1 x 107 IU/mg) (R&D Systems, Abingdon, UK), or vehicle alone (equivalent dilution of 1% bovine serum albumin in phosphate-buffered saline). Cultures were incubated for a further 24 hours at 37°C, 5% CO2, before RNA extraction.
RNA Extraction and Preparation for Hybridization
Total RNA was isolated from all samples using TRIzol reagent (Invitrogen, Paisley, UK) according to the manufacturers instructions. Skin biopsies were processed in 2 ml of TRIzol using a Polytron PT 1200CL homogenizer (Kinematica, Lucerne, Switzerland) for 30 seconds to commence RNA extraction. First-strand cDNA was derived from 10 µg of total RNA using a T7-(dT)24 primer and Superscript II reverse transcriptase (Invitrogen) (42°C, 1 hour). Second-strand cDNA synthesis was performed using Escherichia coli DNA ligase, E. coli DNA polymerase I, and RNase H (Invitrogen) (16°C, 2 hours). Biotin-labeled antisense cRNA was synthesized from purified double-stranded cDNA using the BioArray HighYield RNA transcript labeling kit (Enzo Diagnostics, Farmingdale, NY) according to the manufacturers instructions (37°C, 5 hours).
Array Hybridization and Scanning
Two Affymetrix microarrays were used in the present studies. For the psoriatic biopsies, the HuGeneFL array, representing approximately 5600 full-length human genes, was used, whereas the HG-U133A array, containing approximately 18,000 characterized genes, was used in the analysis of the cytokine-exposed keratinocytes. For the HuGeneFL arrays, fragmentation was performed according to the Affymetrix protocol (20 µg of biotinylated cRNA in 40 mmol/L Tris-acetate, pH 8.1, 100 mmol/L potassium acetate, and 150 mmol/L magnesium acetate at 94°C for 35 minutes). Ten micrograms of fragmented cRNA were hybridized to HuGeneFL arrays according to standard Affymetrix protocols in 100 mmol/L MES buffer, 1 mol/L [Na+], 20 mmol/L ethylenediamine tetraacetic acid, 0.01% Tween 20, 0.1 mg/ml herring sperm DNA, 0.5 mg/ml acetylated bovine serum albumin, and control oligos B2, BioB, BioC, BioD, and cre at 45°C for 16 hours. The fragmentation of antisense cRNA and hybridization to HG-U133A arrays was performed at the Clinical Sciences Centre/Imperial College Microarray Centre using in-house protocols based on those provided by Affymetrix. Further details are available online (http://microarray.csc.mrc.ac.uk, accessed March 2006). For both sets of microarrays, washing and subsequent staining with streptavidin phycoerythrin (two rounds at 10 µg/ml) were performed according to standard Affymetrix protocols before scanning (Affymetrix GeneChip scanner 3000).
Analysis of GeneChip Data
Data from Affymetrix Microarray Suite 5.0 scanning software (CEL files) were imported into GeneSpring (version 7.2, Agilent Technologies, Palo Alto, CA) for analysis. For each experimental set of chips, array normalization was performed using the Robust Multichip Average preprocessing module of GeneSpring 7.2, followed by normalization of each probe set relative to the mean intensity value calculated on the control array. For each experiment, probe sets were initially filtered to exclude all those called as "absent" on all arrays, then for those exhibiting a twofold minimum difference in normalized expression levels. The resulting probe lists were exported to a custom-written database that was used to filter the probe sets further to include only those regulated in at least four of the six replicate experiments for all three comparisons, ie, lesional versus nonlesional skin, IL-1
versus no treatment, and IFN-
versus no treatment, to minimize false-positive data and provide final transcript lists. Biological Process description data from the Gene Ontology Consortium, supplied for each probe set by Affymetrix (Q4 2005 update), were used for transcript annotation.
| Results |
|---|
|
|
|---|
To better understand molecular dysregulation within psoriatic tissue, we were first interested in defining the transcriptional changes occurring in lesional skin compared with adjacent clinically normal tissue. Two shave biopsies were taken from each of six patients with chronic plaque psoriasis. The use of keratome sections reduced the dermal content of these biopsies relative to standard punch or ellipse methodologies (Figure 1)
. RNA was extracted from all biopsies and subsequently processed for microarray analysis using the Affymetrix HuGeneFL array, comprising approximately 5600 well-characterized human transcripts. Analysis of these data revealed 95 probe sets (representing 90 separate transcripts) regulated by a factor of two or more in at least four of the six patients examined (Table 1
and Supplemental Table S1 at http://ajp.amjpathol.org). Seventy-five transcripts were induced and 15 were repressed. The serine protease inhibitor (SERPIN) B4 was the most strongly up-regulated transcript, with a mean induction of 64-fold. In accordance with previous studies,18,19,21
we found marked enrichment for epidermal differentiation complex genes on chromosome 1q21, including S100A7/psoriasin, S100A9/calgranulin B, S100A12/calgranulin C, and the small proline-rich proteins (SPRR) 1A, 1B, 2A, 2B, 2D, and 2E. In addition to SERPINB4, a number of other protease inhibitors were induced (PI3, SERPINB3, and cystatin A), along with the antimicrobial genes ß4 defensin and lipocalin 2. Marked enhancements in the transcription of the hyperproliferative keratins K6, K16, and K17 were also observed as demonstrated previously.22
Functional classification of transcripts revealed clusters of genes involved in immune responses, cellular and electron transport, and epidermal differentiation all markedly up-regulated. Surprisingly, no T cell-specific transcripts were consistently up-regulated. No functional groupings could be discerned among the 15 down-regulated transcripts, with the marked reduction of hemoglobin subunit mRNA likely indicative of greater reticulocytic contamination of the nonlesional biopsies.
|
|
- and IFN-
-Treated Keratinocytes
We were interested in dissecting out the influence of individual cytokines on the chronic inflammatory microenvironment observed in psoriatic skin through in vitro stimulation of keratinocytes with either IL-1
or IFN-
. Following exposure of second-passage normal human epidermal keratinocytes to either 100 ng/ml IL-1
or 20 ng/ml IFN-
cytokine for 24 hours, cRNA was generated for microarray analysis using the Affymetrix HG-U133A microarray. Keratinocytes expressed approximately 10,000 of the 22,283 probe sets present on the arrays. Many genes are represented by more than one probe set on the U133A array, hence 266 separate transcripts were regulated consistently in these experiments (247 by IFN-
alone, 14 by IL-1
alone, and five by both cytokines), according to the filtering criteria used.
The small set of 19 transcripts induced by IL-1
exposure in keratinocytes contained a number of genes found in the epidermal differentiation complex, namely S100A7, S100A9, S100A12, and SPRR2B (Table 2)
. In addition, a group of proteases (MMP1 and MMP10) and protease inhibitors (SERPINB4 and PI3) were identified, along with the antimicrobial transcripts ß4 defensin and lipocalin 2 and a number of genes involved in regulation of the key proinflammatory nuclear factor
B (NF-
B) signaling pathway (IL-32, IL-1F9, I
B, and TNF-
-induced protein 3). Bioactivity of the IL-1
used in the present study was confirmed by induction of IL-8 release from keratinocytes, observed from 1 ng/ml IL-1
(data not shown).
|
exposure (Table 3
exposure.
|
compared with IFN-
, and the subsets of transcripts overexpressed showed surprisingly low levels of overlap (Figure 2)
set were also present in the IL-1
group, ie, IL32, MMP1, mitochondrial superoxide dismutase 2, PDZK1-interacting protein 1, and SERPINB4, which was up-regulated by IL-1
but repressed following IFN-
treatment.
|
Boolean analysis of the three sets of transcripts derived from the present study revealed a marked proportional overlap between the psoriasis and IL-1
exposure groups (nine common transcripts out of 19; 47%) compared with the much larger IFN-
and psoriasis transcript subsets (10 common transcripts out of 252; 4%). Only two transcripts, PDZK1-interacting protein 1 and SERPIN B4, were common to all three groups (Figure 3a)
. Analysis of the 90 regulated psoriatic transcripts in the cytokine-exposed keratinocytes revealed particularly strong and specific correlation with the IL-1
transcriptome in the most markedly up-regulated genes (Figure 3b)
.
|
| Discussion |
|---|
|
|
|---|
(released predominantly by keratinocytes) and IFN-
(an immunocyte-specific cytokine). These cytokines were selected on the basis of their cellular specificity, cutaneous expression levels, and known associations with psoriatic lesions. In addition to finding a marked difference in keratinocyte response to the two cytokine stimuli, a significant correlation was noted between transcripts up-regulated in psoriatic lesional skin and those induced by IL-1
in vitro. Several major studies have previously defined the transcriptome of psoriatic lesional skin.16-19 Because psoriasis affects the epidermis, we were interested in focusing on this compartment of the skin using epidermis-rich keratome shave biopsies, unlike the previous studies that used full-thickness biopsies, which comprise a significant number of dermal cells. There was a high degree of concordance between the previously published psoriatic transcriptomes and the present study with strong expression of transcripts in four main groups: 1) genes located on the epidermal differentiation complex on chromosome 1q21 (also known as the psoriasis susceptibility locus, PSORS423 ), 2) proteases and protease inhibitors, 3) molecules with antimicrobial activity, and 4) hyperproliferation-associated keratins.
As a prototypic proinflammatory cytokine, we chose IL-1
as a suitable candidate to investigate innate immune responses in keratinocytes and found marked similarities between the transcriptome generated and that observed in lesional psoriatic plaques. This supports the significant literature associating members of the IL-1 family with psoriasis.24-27
Although IL-1
is known to be down-regulated in established psoriatic plaques,28
this most likely reflects consumption during plaque initiation27
and measurable levels remain intralesionally. The relatively small number of transcripts induced by IL-1
, compared with IFN-
, may reflect the recently described homeostatic control of IL-1 in murine epidermis, in which a small amount of IL-1
is constitutively released by keratinocytes, and excess IL-1 results in a type I IL-1 receptor-dependent up-regulation of IL-1ra release.29
Consistent with this, a previous study observed an unexpectedly small number of transcripts regulated in ovarian epithelial cells following exposure to IL-1
.30
In addition to those molecules common to the psoriatic lesional transcriptome, a number of genes with broadly opposing roles were induced by IL-1
. Two recently characterized cytokines, IL-1F9 and IL-32, both of which activate the NF-
B proinflammatory pathway,31,32
were induced, the former having been shown previously to be up-regulated in psoriatic plaques.26
Conversely, TNF-
induced protein 333
and I
B both inhibit NF-
B signaling. Likewise, the induction of both proteases (MMP-1 and -10) and protease inhibitors (SERPINB4 and PI3) are further suggestive of complex counter-regulatory mechanisms.
In contrast with the psoriatic and IL-1
transcriptomes, we found a distinct set of transcripts up-regulated by IFN-
in keratinocytes. This was surprising, given the strong evidence for the role of T-helper cells in psoriasis.34,35
There was considerably more transcriptional activity in these cells compared with IL-1
treatment, and the induced transcripts were dominated by the ligands of the CXCR3 chemokine receptor, CXCL9, -10, and -11 and class II major histocompatibility complex transcripts, involved in antigen presentation to CD4+ T-helper cells. Subsequent real-time polymerase chain reaction studies verified the marked induction of CXCL9 by IFN-
in keratinocytes. Although CXCR3 is expressed primarily on Th1 memory T cells, Flier et al36
showed that psoriatic skin expresses very low levels of these three ligands compared with other inflammatory dermatoses.
A further illustration of the differences between the two cytokine-induced transcriptomes is the observation that SERPINB4, the most up-regulated transcript in the psoriatic data set, was markedly down-regulated in all keratinocyte cultures treated with IFN-
, in contrast to the consistent induction observed in IL-1
-treated samples. Further, the coordinated repression of transcripts involved in cell cycle regulation and DNA repair and replication with IFN-
treatment, important in antiviral activity, was not observed in the psoriatic data set, where both of the regulated cell cycle-associated genes (ACPP and MPHOSPH6) were induced. A previous microarray analysis of the keratinocyte transcriptome following 24 hours of IFN-
exposure reported a similar set of induced transcripts, although large increases were also seen in the macrophage-recruiting chemokines CCL2 and CCL8, which were not replicated in the present data set, and a higher number of repressed, rather than induced, transcripts was observed at this time point in the former study.37
However, a key difference between the two analyses is the use of multiple donors in the present work, rather than a single batch of cells used previously. Given the high degree of intra- and interindividual variability commonly observed with microarray studies, the importance of biological replication to transcriptome accuracy cannot be underestimated.
In addition to IFN-
, Banno et al38
examined the transcriptome of keratinocytes exposed to the other principal primary cytokine, TNF-
, and reported clear differences from those found with IL-1
in the present study. For example, no up-regulation of any of the S100 proteins, PI3, SERPINB4, or ß4 defensin was reported, although significant induction of CXCL10 and -11 was observed. Whereas this study used numerous differences in protocol from that used in the present one, previous microarray data using a chondrosarcoma cell line confirmed significant differences in transcriptome induction following exposure to IL-1
or TNF-
.39
Studies by Wei et al40
examining the effects of IL-1ß and IFN-
on organ-cultured skin biopsies reported a greater degree of overlap between these two cytokines than that observed here. However, only seven proteins were analyzed by semiquantitative immunohistochemistry in the former study, with lower thresholds required for significance.
The keratinocyte IL-1
transcriptome described here represents the closest approximation to that seen in psoriasis of all microarray studies described to date. It correlates better than the transcriptional profiles seen in other chronic inflammatory dermatoses such as atopic dermatitis, where disease-specific overexpression of the Th2-attracting ß-chemokines CCL13, -18, and -27 and no up-regulation of highly induced psoriatic/IL-1 genes DEFB4, PI3, or SPRR2B have been reported.17
Likewise, the IL-1 keratinocyte transcriptome is distinct from that induced following ultraviolet B irradiation41
and the wound-healing response seen in neonatal mice42
where, in neither case, were any of these three key genes up-regulated, despite a number of psoriatic transcripts being expressed as part of the "late effector" cluster in the latter study.
The transcripts shared between lesional psoriatic tissue and IL-1
-stimulated keratinocytes may suggest a specific role for IL-1 in psoriatic pathology. We have previously demonstrated that transgenic mice overexpressing IL-1
in basal keratinocytes developed focal inflammatory skin lesions,43
whereas others have reported psoriasiform lesions on BALB/c IL-1 receptor antagonist knockout mice.44
The strong induction by IL-1
of antimicrobial molecules is of particular interest. S100A7 has been shown recently to exhibit potent antimicrobial properties, particularly against E. coli.45
Our data are in agreement with studies in which lesions from psoriasis and atopic dermatitis were compared, and a marked deficit in antimicrobial molecules was noted in the skin of patients with atopic dermatitis,46,47
further suggestive of an important role for innate immunity, specifically in psoriasis. Recent interest in the role of the Th17 effector lineage in psoriasis has yielded data indicating that Th17-associated cytokines up-regulate antimicrobial molecules, including ß4 defensin and S100A9, in keratinocytes.48
Although the transcriptome data presented strongly suggest a bias toward innate immune responses in psoriatic lesions, it is important to note that they do not exclude the possibility that IFN-
responses are actively suppressed within inflamed epidermis. This is supported by the relative infrequency of epidermal keratinocyte HLA-DR expression within psoriatic plaques, despite the widely reported sensitivity of cultured human keratinocytes to induction of this molecule by IFN-
. Such an effect could be mediated by transcriptional interference involving different members of the STAT family of proteins induced, following receptor engagement by the wide variety of cytokines present in psoriatic epidermis. Alternatively, there is evidence from a murine autoimmunity model that Th17 responses may be antagonized by IFN-
,49
hence the lack of IFN-
signature transcripts observed in psoriatic tissue.
In this study, we have demonstrated that keratinocytes respond to cytokines known to be strongly associated with either innate or adaptive immune responses in the cutaneous microenvironment through discreet pathways at the transcriptional level and that exposure of human keratinocytes to IL-1
results in the most psoriatic transcriptome described to date. Consequently, we propose that the inflammatory milieu in established psoriatic lesions is much more suggestive of dominant innate, rather than adaptive, immune responses. Although further work is required to validate this hypothesis, these data provide a novel perspective for investigating the immunopathology of psoriasis.
|
| Acknowledgements |
|---|
| Footnotes |
|---|
Supported by The Psoriasis Association (UK), The Skin Treatment and Research Trust (START), and the Department of Health (UK) via the National Institute for Health Research (NIHR) comprehensive Biomedical Research Centre award to Guys and St. Thomas NHS Foundation Trust in partnership with Kings College London.
Supplemental material for this article can be found on http://ajp.amjpathol.org.
Accepted for publication March 23, 2007.
| References |
|---|
|
|
|---|
, interleukin-2, and tumor necrosis factor-
, defining TC1 (cytotoxic T lymphocyte) and TH1 effector populations: a type 1 differentiation bias is also measured in circulating blood T cells in psoriatic patients. J Invest Dermatol 1999, 113:752-759[CrossRef][Medline]
production. J Exp Med 2005, 202:135-143
and IL-1
, function as an antagonist and agonist of NF-
B activation through the orphan IL-1 receptor-related protein 2. J Immunol 2001, 167:1440-1446
and increased nonfunctional IL-1ß. J Immunol 1990, 144:4593-4603[Abstract]
(IL-1
) and IL-1 receptor antagonist in murine keratinocytes. J Invest Dermatol 2005, 124:1267-1274[CrossRef][Medline]
determined by microarray analysis. J Endocrinol 2004, 183:19-28
B and MAPKs. J Biol Chem 2004, 279:13677-13688
. Immunity 2005, 22:131-142[Medline]
. J Exp Med 2004, 199:731-736
(TNF
) in epidermal keratinocytes revealed using global transcriptional profiling. J Biol Chem 2004, 279:32633-32642
on proinflammatory cytokine and matrix metalloproteinase expression in human chondrosarcoma cells. Inflamm Res 2004, 53:377-389[Medline]
induce the regenerative epidermal phenotype of psoriasis in the transwell skin organ culture system: IFN-
up-regulates the expression of keratin 17 and keratinocyte transglutaminase via endogenous IL-1 production. J Pathol 1999, 187:358-364[CrossRef][Medline]
in basal epidermis. Proc Natl Acad Sci USA 1995, 92:11874-11878This article has been cited by other articles:
![]() |
M. A. Morris, C. W. Dawson, W. Wei, J. D. O'Neil, S. E. Stewart, J. Jia, A. I. Bell, L. S. Young, and J. R. Arrand Epstein-Barr virus-encoded LMP1 induces a hyperproliferative and inflammatory gene expression programme in cultured keratinocytes J. Gen. Virol., November 1, 2008; 89(11): 2806 - 2820. [Abstract] [Full Text] [PDF] |
||||
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |